Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACACTTGTATGCCAGGA
.(((((((((((((((((....&))))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014423
GeneSymbolAFF4
Binding site6605,6624
Score0.923
Seed1
Au0.544
Energy-27.0
Binding len19
Me-3.793
Phylopstem2.703012222222222
Phylopflank3.7434956800000005
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure