Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACCCAAAAAGGCTGAGAAGGCAGCTGCT
..((((((((((((((.....&))))))................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014423
GeneSymbolAFF4
Binding site2074,2105
Score0.846
Seed1
Au0.485
Energy-21.2
Binding len31
Me-4.957
Phylopstem3.5369941333333346
Phylopflank3.55123875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure