Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCAGATAAACTTACAGCTACAGCTGCC
..(((((((.(((((((((..&.))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014423
GeneSymbolAFF4
Binding site6870,6900
Score1.0
Seed1
Au0.544
Energy-26.1
Binding len19
Me-6.2
Phylopstem3.308752888888889
Phylopflank3.4830603792500003
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure