Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGAGTTGCTGCAGCAGCAGG
((((.((((((((.....((.&)).....)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014426
GeneSymbolSNX5
Binding site382,403
Score1.0
Seed0
Au0.368
Energy-20.7
Binding len21
Me-9.882
Phylopstem-0.3228946375000001
Phylopflank0.15911044499999996
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end2
PositionCDS
2D Structure