Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGAGGCTGCAGCTGCGGA
((((((((((((((.......&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014431
GeneSymbolPALD1
Binding site2613,2633
Score1.0
Seed1
Au0.397
Energy-23.2
Binding len16
Me-4.906
Phylopstem1.3164886285714288
Phylopflank4.3806960625
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure