Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGCGGGCAGCC
.....(((((.((((((((((&))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014433
GeneSymbolRSPH14
Binding site1087,1105
Score0.846
Seed0
Au0.426
Energy-23.8
Binding len18
Me-16.49
Phylopstem2.8466674000000003
Phylopflank1.0114852
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure