Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTGTCAGCCTGTCCCTGCGGCTGTT
..((((((((((..(..((((&.))))..).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014437
GeneSymbolSLC39A1
Binding site1141,1168
Score0.923
Seed1
Au0.353
Energy-21.7
Binding len20
Me-7.336
Phylopstem1.5726621
Phylopflank3.1017399250000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure