Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCGCGCTTGCGGCGCCCAGGCCCAGCGGCCGTAGCTAGCGT
.(((((((((((((((..(((&.)))..)))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014445
GeneSymbolSERP1
Binding site191,235
Score0.923
Seed1
Au0.235
Energy-26.9
Binding len23
Me-3.793
Phylopstem-0.042303156250000015
Phylopflank0.36772951875000004
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end6
Position5UTR
2D Structure