Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAACAGCGCACGCTGCAGA
((((((((((.(((((..(((&))).)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014448
GeneSymbolARHGEF16
Binding site1313,1334
Score1.0
Seed1
Au0.412
Energy-21.7
Binding len21
Me-6.762
Phylopstem3.5527952727272734
Phylopflank3.0305164475
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure