Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACCGTAGCTC
....((((((((((((.....&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014448
GeneSymbolARHGEF16
Binding site1883,1896
Score0.846
Seed0
Au0.279
Energy-20.7
Binding len13
Me-9.547
Phylopstem1.2002062500000001
Phylopflank1.6340358312499998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure