Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTTTATAAGCCTTTGCCAGGTG
((((((((.....((((((((.&))))))))......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014452
GeneSymbolTNFRSF21
Binding site2584,2607
Score0.846
Seed1
Au0.574
Energy-17.7
Binding len23
Me-13.697
Phylopstem3.3038666250000004
Phylopflank2.2906577537500006
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure