Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACCTTGTTGGCCAGGC
.((((((..((((.(((((...&))))).))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014455
GeneSymbolRNF115
Binding site4399,4418
Score0.923
Seed1
Au0.544
Energy-20.5
Binding len19
Me-8.02
Phylopstem0.11717333333333335
Phylopflank-0.10714019125000002
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure