Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAATCACTTCTTTCACAGCAGTTGTAT
.((((((((((((((((((((&)))))))))))............))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014455
GeneSymbolRNF115
Binding site953,986
Score0.923
Seed1
Au0.544
Energy-24.8
Binding len33
Me-3.793
Phylopstem-0.3045107406250001
Phylopflank0.04877443000000002
Longest consecutive pairings11
Position of longest consecutive pairings22
Pairings in 3prime end8
PositionCDS
2D Structure