Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTATGACCGAGCCTACAACCGGGCCAGCTGCAAG
((((((((((((((((.((((&.)))))))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014467
GeneSymbolSRPX2
Binding site1173,1209
Score1.0
Seed1
Au0.471
Energy-29.5
Binding len25
Me-3.938
Phylopstem3.706748894736843
Phylopflank3.480946798749999
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure