Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTCAGCCGCAACCGTAGCGGCT
..((.(((((((((((..(((&.)))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014481
GeneSymbolAPEX2
Binding site270,295
Score0.923
Seed0
Au0.5
Energy-24.7
Binding len19
Me-9.076
Phylopstem2.992901545454545
Phylopflank3.7170838562499995
Longest consecutive pairings14
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure