Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTATGACCCCACAGCTGCC
..(((((((.((((((.((((&))))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014483
GeneSymbolRBMS3
Binding site1370,1391
Score0.846
Seed1
Au0.515
Energy-22.1
Binding len21
Me-6.2
Phylopstem6.837325714285714
Phylopflank5.18615785875
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure