Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGGACCGCGTGCGTGCTAATCGTGGGCTGCGGT
((((((((((((((.(.((((&)))).).))))))................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014484
GeneSymbolMOCS3
Binding site260,298
Score0.846
Seed1
Au0.324
Energy-23.9
Binding len38
Me-4.673
Phylopstem2.4870912200000004
Phylopflank3.5290961217500003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure