Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTGTTTAAAGGACAACTACAAATCATGCTGGA
..(((((((((((((((((...&))))))))))....................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014488
GeneSymbolRAB30
Binding site9591,9629
Score0.846
Seed1
Au0.662
Energy-17.7
Binding len38
Me-4.957
Phylopstem6.257993972972973
Phylopflank4.068012858750001
Longest consecutive pairings10
Position of longest consecutive pairings28
Pairings in 3prime end5
Position3UTR
2D Structure