Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&TGCAATAAATATTAGTCAAATAAACATTTAAGTGCCAAGGTGGGGTGGTAGTGG
((((((((((((((((((...&.))))))))....)))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_014488
GeneSymbolRAB30
Binding site3449,3503
Score0.846
Seed1
Au0.603
Energy-19.2
Binding len24
Me-3.938
Phylopstem0.2266993318181818
Phylopflank0.3032552950000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure