Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACAATATTGTAGGTGCAAT
(((((.((((((((((.(((.&))).)))))..))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014488
GeneSymbolRAB30
Binding site3432,3455
Score0.846
Seed0
Au0.721
Energy-19.8
Binding len23
Me-5.839
Phylopstem0.4737026833333333
Phylopflank0.2340638325
Longest consecutive pairings5
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure