Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTATACAATTGCAGAATGCT
..(((.((((((((((((((.&))).)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014488
GeneSymbolRAB30
Binding site7851,7872
Score0.923
Seed0
Au0.691
Energy-18.9
Binding len21
Me-6.858
Phylopstem0.6265956
Phylopflank0.7433057567499999
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure