Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGTGGTAACGGTAGCTGTT
..((((((((.((((..((((&))))....)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014497
GeneSymbolZNF638
Binding site2746,2768
Score0.846
Seed1
Au0.632
Energy-18.0
Binding len22
Me-8.015
Phylopstem1.9958098749999997
Phylopflank1.7730588437500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure