Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACATTTGCCTGTGCTTCAGGG
.(((((((((((((((((((..&))))))))).)..)))))..)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014500
GeneSymbolHTATSF1
Binding site2394,2419
Score0.846
Seed1
Au0.574
Energy-17.9
Binding len25
Me-3.793
Phylopstem1.09222555
Phylopflank1.2761718075000001
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end6
Position3UTR
2D Structure