Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACTTGGATGGGAACGATGAGTTTGATGAGCAGTTGCGAA
(((((((((((((((......&))))).........................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014500
GeneSymbolHTATSF1
Binding site104,145
Score0.846
Seed1
Au0.529
Energy-16.6
Binding len41
Me-4.171
Phylopstem2.9579819100000004
Phylopflank0.7668765587499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure