Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGTGTGGCTGCAAA
(((((((((((....((((((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014503
GeneSymbolUTP20
Binding site2017,2035
Score0.923
Seed1
Au0.529
Energy-20.6
Binding len18
Me-10.166
Phylopstem3.069022727272728
Phylopflank3.1495943675
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure