Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGGCTTCGGCTGCTGCAT
.((((((.((.(..((..((.&))..))..).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014503
GeneSymbolUTP20
Binding site6434,6454
Score0.846
Seed1
Au0.529
Energy-19.4
Binding len20
Me-11.078
Phylopstem3.4101571666666666
Phylopflank3.6228534224999995
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure