Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCATAGAAACAAAAGCAGAGCAGCTGACAAA
((((((((((..(((((((((&)))))..............)))).))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014503
GeneSymbolUTP20
Binding site6612,6648
Score0.846
Seed1
Au0.544
Energy-19.0
Binding len36
Me-10.109
Phylopstem2.174377909090909
Phylopflank3.9213212075000006
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end8
PositionCDS
2D Structure