Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTAAAGAGGGCTGCTCAACTGCAAGGACGCTGTAAG
(((((((((((((((...(((&.)))...)))))))).....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014508
GeneSymbolAPOBEC3C
Binding site1,39
Score0.923
Seed1
Au0.5
Energy-21.3
Binding len28
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end5
Position5UTR
2D Structure