Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATATGTCTCCGTCCCGCTCAACTGCAGCTGTGGG
(((((((((((((((...((.&.))...))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014521
GeneSymbolSH3BP4
Binding site1628,1665
Score0.923
Seed1
Au0.368
Energy-26.7
Binding len22
Me-4.171
Phylopstem1.9835790666666666
Phylopflank3.700733037500001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure