Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGAGAGGCTGCGGCTGTAC
.(((((((((((((.....((&))....))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014521
GeneSymbolSH3BP4
Binding site205,225
Score1.0
Seed1
Au0.441
Energy-20.9
Binding len20
Me-4.762
Phylopstem-0.3935031230769231
Phylopflank-0.154789835
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure