Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTCCAGGGCAGCAGCTGCC
..((((((((.((((..((((&))))..)...))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014548
GeneSymbolTMOD2
Binding site7144,7167
Score0.846
Seed1
Au0.441
Energy-20.5
Binding len23
Me-8.015
Phylopstem1.040063725
Phylopflank0.5962889167124998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure