Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGGAGATGGAAGACCTGCGGCTCAAGCACCGCACGCTGCAGA
((((((((((((((((.((((&.)))))))........)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014550
GeneSymbolCARD10
Binding site1281,1329
Score0.923
Seed1
Au0.412
Energy-24.5
Binding len31
Me-3.938
Phylopstem2.5529660200000004
Phylopflank1.9101106537499999
Longest consecutive pairings7
Position of longest consecutive pairings23
Pairings in 3prime end7
PositionCDS
2D Structure