Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCTGCAGCTGCAC
.(((((((((((.(((.....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353321
GeneSymbolIGSF11
Binding site81,96
Score0.923
Seed1
Au0.294
Energy-23.1
Binding len15
Me-5.082
Phylopstem3.330400545454545
Phylopflank1.8873637938750003
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure