Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAAGGCTTTACCAGCAGTGGACTGGAGCCAGCCAGGGTCA
.(((((((((((((((((...&))))))))).......................)).)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_014553
GeneSymbolTFCP2L1
Binding site5653,5695
Score0.897
Seed1
Au0.456
Energy-28.6
Binding len42
Me-3.793
Phylopstem-0.07470646829268292
Phylopflank-0.022806209999999938
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end5
Position3UTR
2D Structure