Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTGGGCCGTGCTGCAGA
(((((((.((((((...(((.&)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014555
GeneSymbolTRPM5
Binding site3334,3354
Score0.923
Seed1
Au0.338
Energy-23.3
Binding len20
Me-7.22
Phylopstem0.03417128571428573
Phylopflank2.5531296975
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure