Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCAGG
((((((((((((((((.((((&)))).))))....................)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014562
GeneSymbolOTX1
Binding site844,886
Score0.846
Seed1
Au0.368
Energy-26.0
Binding len42
Me-3.938
Phylopstem2.4972152777777774
Phylopflank1.886891582
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure