Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGCAAAGGGAGCTGCGAA
((((((((.(..((((..(((&)))..))))..).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014568
GeneSymbolGALNT5
Binding site2709,2731
Score0.923
Seed1
Au0.544
Energy-21.1
Binding len22
Me-11.166
Phylopstem3.6316551250000004
Phylopflank3.7436594562500005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure