Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACTTCTAGTATTAGTTTGGGACTGCAGAGGGGCAAA
((((..(((((((((((((((&))))))).................))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014568
GeneSymbolGALNT5
Binding site6419,6460
Score0.923
Seed0
Au0.603
Energy-21.1
Binding len41
Me-9.958
Phylopstem0.040193559375
Phylopflank0.32363538375
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure