Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGTTTGCATTGCAGCTGGGAT
((.(((((((((.((((((.(&).))))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014569
GeneSymbolZKSCAN5
Binding site3697,3718
Score0.885
Seed0
Au0.559
Energy-20.7
Binding len21
Me-6.784
Phylopstem0.16563003333333334
Phylopflank-0.22562622974999996
Longest consecutive pairings15
Position of longest consecutive pairings4
Pairings in 3prime end7
Position3UTR
2D Structure