Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAACAGCTGCTGCAAA
(((((((.((.((((......&.)))).)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353322
GeneSymbolIGSF11
Binding site3156,3174
Score0.846
Seed1
Au0.574
Energy-18.9
Binding len17
Me-9.309
Phylopstem0.36888028571428577
Phylopflank0.815567835
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure