Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGAGCTGTCCCGGCCGCAGCAGTAC
.(((.((((((((((...(((&.)))....)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014574
GeneSymbolSTRN3
Binding site354,383
Score0.846
Seed0
Au0.324
Energy-21.8
Binding len23
Me-8.145
Phylopstem3.1947609999999997
Phylopflank2.8953664325
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure