Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTACAAATCCTGCCAGGG
.(((((((.....(((((((..&))))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014576
GeneSymbolA1CF
Binding site2179,2199
Score0.923
Seed1
Au0.544
Energy-18.4
Binding len20
Me-13.553
Phylopstem-0.024157371428571422
Phylopflank-0.22649706375
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure