Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGCTAGTCATTATTATGCCAGGTT
((((((((((............&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014576
GeneSymbolA1CF
Binding site7523,7548
Score1.0
Seed1
Au0.544
Energy-16.6
Binding len12
Me-13.224
Phylopstem3.2550011
Phylopflank3.3028294000000007
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure