Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTCAGCAGCCGCGGTCGCAAC
((((.(((((((((((..(((&)))....))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014578
GeneSymbolRHOD
Binding site623,647
Score0.846
Seed0
Au0.309
Energy-25.2
Binding len24
Me-8.057
Phylopstem0.8122146363636364
Phylopflank0.9243727275000003
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure