Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGTGACCAGGG
.(((((((((((..........&)))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014587
GeneSymbolSOX8
Binding site1554,1567
Score0.846
Seed1
Au0.279
Energy-17.0
Binding len13
Me-6.908
Phylopstem-0.6141079166666666
Phylopflank-0.20854280625
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end0
Position3UTR
2D Structure