Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGATTATTCCACAAAGAAGGGCTGCCGTTTGGTCC
.(((((.((((((((((((((&)))))))...............))))))).)...)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_014587
GeneSymbolSOX8
Binding site1715,1754
Score0.846
Seed0
Au0.412
Energy-27.7
Binding len39
Me-5.337
Phylopstem0.1335432482758621
Phylopflank-0.08657001875000005
Longest consecutive pairings7
Position of longest consecutive pairings32
Pairings in 3prime end8
Position3UTR
2D Structure