Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGGAGGCCGAGCTGCC
..((((((.(((((...((((&))))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014588
GeneSymbolVSX1
Binding site157,176
Score0.846
Seed1
Au0.265
Energy-20.4
Binding len19
Me-6.982
Phylopstem0.62514475
Phylopflank0.4466078625000002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure