Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGCACCTACAACCGCAAATATGCCCATTATCCCAACAAGCTGTG
..((((((((((((((.((((&.)))))))))))))......................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014589
GeneSymbolPLA2G2E
Binding site413,462
Score0.846
Seed1
Au0.397
Energy-23.5
Binding len42
Me-4.957
Phylopstem0.8040969361111109
Phylopflank1.13239327975
Longest consecutive pairings13
Position of longest consecutive pairings28
Pairings in 3prime end7
PositionCDS
2D Structure