Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTAAACACGGGGCTTGCAAC
((((((((.(((((..(((((&)))))..))).)).)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014590
GeneSymbolERVW-1
Binding site2792,2816
Score0.885
Seed1
Au0.5
Energy-21.7
Binding len24
Me-5.962
Phylopstem0.145055
Phylopflank-0.014181562500000005
Longest consecutive pairings5
Position of longest consecutive pairings19
Pairings in 3prime end6
Position3UTR
2D Structure