Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGGAAATCTCAGCTGCAC
.((((((((.((((...(((.&))).....)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014590
GeneSymbolERVW-1
Binding site2600,2622
Score0.846
Seed1
Au0.471
Energy-20.3
Binding len22
Me-6.004
Phylopstem-0.026829375000000044
Phylopflank0.0004124374999999944
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure